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Posters

  1. Rupa Bhowmick and Ram Rup Sarkar: Deciphering the Characteristic Behaviors of Glioblastoma: A Constraint Based Modeling study of Complex Metabolic Network at 24th International Conference on Research in Computational Molecular Biology- RECOMB 2020, held online during June 22-25, 2020.
  2. Sutanu Nandi, Piyali Ganguli and Ram Rup Sarkar: Essential gene prediction using limited gene essentiality information – A novel Machine Learning Approach at Accelerating Biology 2020: SNiPs to SPiNs by C-DAC, Pune, held at IISER Pune, Maharashtra, India during February 04-06, 2020. (Best Poster Award)
  3. Gauri Panditrao, Piyali Ganguli and Ram Rup Sarkar: Delineating infection strategies through Host-Pathogen PPI network in Visceral Leishmaniaisis at National Science Day at NCL, Pune, India during February 25 - 28, 2020. (NCL-RF Agnimitra Memorial Best Poster Award)
  4. Rupa Bhowmick and Ram Rup Sarkar: Complex metabolic features and key regulators in determining characteristic behaviors of Glioblastoma at National Conference on Emerging Trends in Disease Model Systems at NCCS, Pune, India during March 25 - 27, 2019. (Best Poster Award)
  5. Piyali Ganguli and Ram Rup Sarkar: Identification of potential Immunostimulators for regulating the TH1/TH2 response dynamics during Leishmaniasis EMBO Practical Course: The 2019 whole-cell modeling summer school held during 07 – 13 April, 2019 at Barcelona, Spain (Travel Award from EMBO and DST-ITS)
  6. Piyali Ganguli and Ram Rup Sarkar: Unveiling Immuno-regulatory mechanisms in the tumor microenvironment and design of protocols for triggering cancer remission at CSIR-National Chemical Laboratory, Pune, India during National Science Day February 26-28, 2019 (NCL-RF Agnimitra Memorial Best Poster Award)
  7. Piyali Ganguli and Ram Rup Sarkar: Unveiling Immuno-regulatory mechanisms in the tumor microenvironment and design of protocols for triggering cancer remission at Humboldt Kolleg on Innovation & Entrepreneurship: Role of Science & Technology by Humboldt Academy, Pune Chapter, held at Prakruti Resorts, Kashid, Maharashtra, India during January 31 - February 2, 2019. (Best Poster Award)
  8. Sutanu Nandi, Abhishek Subramanian and Ram Rup Sarkar: An integrative machine learning strategy for improved prediction of essential genes in Escherichia coli metabolism using flux-coupled features at CSIR-National Chemical Laboratory, Pune, India during National Science Day February 25-28, 2018. (Best Poster Award).
  9. Abhishek Subramanian and Ram Rup Sarkar: Understanding the metabolic organization of the parasite Leishmania infantum and its implications on adaptation to host resources at First IBSE International Symposium ‘From Genotype to Phenotype: Computational Approaches to Understand Biological Systems’, Indian Institute of Technology Madras, Chennai during January 22-24, 2018. (Best Poster Award).
  10. Sutanu Nandi and Ram Rup Sarkar: An Integrative Machine Learning Strategy for Essential Genes Prediction in Escherichia coli Metabolism using Flux-Coupled Features at the conference Accelerating Biology 2018: Digitizing Life, C-DAC, Pune during January 09-11, 2018. (Best Poster Award-Consolation Prize).
  11. Noopur Sinha and Ram Rup Sarkar: Exploration of Structural Stability and Binding Mechanisms of Smoothened Protein Inhibitors at the conference Accelerating Biology 2018: Digitizing Life, C-DAC, Pune during January 09-11, 2018.
  12. Saikat Chowdhury and Ram Rup Sarkar: Understanding of Glioblastoma Development using Boolean modeling of Notch Signaling Pathway at the conference Accelerating Biology 2017, C-DAC, Pune during January 17-19, 2017.
  13. Piyali Ganguli, Saikat Chowdhury, Shomeek Chowdhury and Ram Rup Sarkar: Identification of Potential Immunostimulators for Regulating the Th1/Th2 Response Dynamics during Leishmaniasis at National Seminar on Computational and Mathematical Biology, organized by the Department of Mathematics, Institute of Chemical Technology, Mumbai, during September 10-11, 2016.
  14. Noopur Sinha, Saikat Chowdhury and Ram Rup Sarkar: An in-silico structural Insight of NICD MAML Interactions: Virtual Screening, Docking & Molecular Dynamics Study to Identify Potential Inhibitor at National Seminar on Computational and Mathematical Biology, organized by the Department of Mathematics, Institute of Chemical Technology, Mumbai, during September 10-11, 2016.   
  15. Rupa Bhowmick, Abhishek Subramanian and Ram Rup Sarkar: An In-Silico Insight into the Complex Metabolic Behavior of Glioblastoma at CSIR-National Chemical Laboratory, Pune, during "National Science Day" February 25-29, 2016. (Best Poster Award)
  16. Abhishek Subramanian, and Ram Rup Sarkar: Comparative codon usage bias analyses in Leishmania species and its functional implications at CSIR-National Chemical Laboratory, Pune during "National Science Day" February 25-29, 2016. (Best Poster Award)
  17. Noopur Sinha, Saikat Chowdhury and Ram Rup Sarkar: An in-silico structural Insight of NICD MAML Interactions: Virtual Screening, Docking & Molecular Dynamics Study to Identify Potential Inhibitor at CSIR-NCL, Pune during "National Science Day" February 25-29, 2016.
  18. Piyali Ganguli, Saikat Chowdhury, Shomeek Chowdhury and Ram Rup Sarkar: Identification of Potential Immunostimulators for Regulating the Th1/Th2 Response Dynamics during Leishmaniasis at CSIR-National Chemical Laboratory, Pune, during "National Science Day" February 25-29, 2016.
  19. Saikat Chowdhury and Ram Rup Sarkar: Computational Approach to Study the Importance of Ca2+ Channel and Co-receptor Molecules during T-cell Activation at CSIR-National Chemical Laboratory, Pune, during "National Science Day" February 25-29, 2016.
  20. Saikat Chowdhury and Ram Rup Sarkar: Identification of important drug targets in the integrated human Hedgehog and Notch pathways to treat Glioblastoma multiforme at the conference Accelerating Biology 2016: Decoding the Deluge, C-DAC, Pune during January 19th-21st, 2016.
  21. Abhishek Subramanian and Ram Rup Sarkar: Comparative codon usage bias analyses in Leishmania species and its functional implications at the conference Accelerating Biology 2016: Decoding the Deluge, C-DAC, Pune during January 19th-21st, 2016.
  22. Noopur Sinha, Saikat Chowdhury and Ram Rup Sarkar: An in-silico structural Insight of NICD MAML Interactions: Virtual Screening, Docking & Molecular Dynamics Study to Identify Potential Inhibitor at the conference Accelerating Biology 2016: Decoding the Deluge, C-DAC, Pune during January 19th-21st, 2016.
  23. Rupa Bhowmick, Abhishek Subramanian  and Ram Rup Sarkar: An In-Silico Insight into the Complex Metabolic Behavior of Glioblastoma at the NNMCB National meeting-2015, CSIR- NCL & IISER, Pune, December 27th-30th, 2015. (Best Poster Award)
  24. Saikat Chowdhury, Piyali Ganguli, and Ram Rup Sarkar: Computational Approach to Study the Importance of Ca2+ Channel and Co-receptor Molecules during T-cell Activation at the NNMCB National meeting-2015, CSIR- NCL & IISER, Pune,  December 27th-30th, 2015.
  25. Abhishek Subramanian and Ram Rup Sarkar: Comparative codon usage bias analyses in Leishmania species and its functional implications at the NNMCB National meeting-2015, CSIR- NCL & IISER, Pune, December 27th-30th, 2015.
  26. Piyali Ganguli, Saikat Chowdhury, Shomeek Chowdhury  and Ram Rup Sarkar: Identification of Potential Immunostimulators for Regulating the Th1/Th2 Response Dynamics during Leishmaniasis at the NNMCB National meeting-2015, CSIR- NCL & IISER, Pune, December 27th-30th, 2015.
  27. Noopur Sinha,  Saikat Chowdhury and Ram Rup Sarkar: An in silico structural Insight of NICD-MAML Interactions: Virtual Screening, Docking & Molecular Dynamics Study to Identify Potential Inhibitor  at the NNMCB National meeting-2015, CSIR- NCL & IISER, Pune, December 27th-30th, 2015.
  28. Saikat Chowdhury, Abhishek Subramanian, Piyali Ganguli, Rupa Bhowmick, Sutanu Nandi, Noopur Sinha and Ram Rup Sarkar: Understanding Biochemical Pathways and Applications in Pharmaceutical Research at CSIR Open Day, CSIR-National Chemical Laboratory, Pune on September 26, 2015.
  29. Shomeek Chowdhury, Saikat Chowdhury and  Ram Rup Sarkar: Reconstruction and Graph Theoretical Analysis of Human Notch Signaling Pathway at Foundation Day  Symposium, MS University of Baroda, Baroda on September 28, 2015. (Best Poster Award – 2nd Prize)
  30. Abhishek Subramanian and Ram Rup Sarkar: Reconstruction and Analysis of Leishmania infantum energy metabolism at NNMCB Symposium on Mathematical and Computational Biiology, IIT-Gandhinagar, March 21-22, 2015.
  31. Piyali Ganguli, Saikat Chowdhury, Rupa Bhowmick, and Ram Rup Sarkar: Computational Approach to Study the Temporal Protein Expression Pattern in the Intracellular Signaling Cascade during T-cell Activation at NNMCB Symposium on Mathematical and Computational Biiology, IIT-Gandhinagar, March 21-22, 2015.
  32. Rupa Bhowmick and Ram Rup Sarkar: Understanding  Astrocyte and Glioblastoma Metabolism using Flux Balance Analysis at NNMCB Symposium on Mathematical and Computational Biiology, IIT-Gandhinagar, March 21-22, 2015.
  33. Piyali Ganguli, Saikat Chowdhury, Rupa Bhowmick, and Ram Rup Sarkar: Computational Approach to Study the Temporal Protein Expression Pattern in the Intracellular Signaling Cascade during T-cell Activation at CSIR-National Chemical Laboratory, Pune, "National Science Day" February 25-28, 2015.
  34. Saikat Chowdhury and Ram Rup Sarkar: A Computational Study to Identify Biomarkers and Drug Targets in Human Notch Signaling Pathway at CSIR-National Chemical Laboratory, Pune, "National Science Day" February 25-28, 2015. (Best Poster Award)
  35. Abhishek Subramanian and Ram Rup Sarkar: Reconstruction and Analysis of Leishmania infantum energy metabolism at CSIR-National Chemical Laboratory, Pune, during "National Science Day" February 25-28, 2015.
  36. Saikat Chowdhury and Ram Rup Sarkar: A Computational Study to Identify Biomarkers and Drug Targets in Human Notch Signaling Pathway at Symposium on “Accelerating Biology 2015…Catalyzing Evolution”, Centre for Development of Advanced Computing (C-DAC), Pune, January 20-22, 2015. (Best Poster Award)
  37. Abhishek Subramanian and Ram Rup Sarkar: Reconstruction and Analysis of Leishmania infantum energy metabolism at Symposium on “Accelerating Biology 2015…Catalyzing Evolution”, Centre for Development of Advanced Computing (C-DAC), Pune, January 20-22, 2015. (Best Poster Award - Special Mention)
  38. Piyali Ganguli1, Saikat Chowdhury, Rupa Bhowmick, and Ram Rup Sarkar: Computational Approach to Study the Temporal Protein Expression Pattern in the Intracellular Signaling Cascade during T-cell Activation at Symposium on “Accelerating Biology 2015…Catalyzing Evolution”, Centre for Development of Advanced Computing (C-DAC), Pune, January 20-22, 2015.
  39. Abhishek Subramanian and Ram Rup Sarkar: Dynamics of Hedgehog Pathway and Control of Cancer through GLI regulation at CSIR-National Chemical Laboratory, Pune, "National Science Day" February 28, 2014.
  40. Saikat Chowdhury and Ram Rup Sarkar: Drug Target Identification in Cancer Therapy Using Graph Theory and Boolean Analysis at the "International Conference on Emerging Trends in Applied Mathematics" held at Department of Applied Mathematics, University of Calcutta, Kolkata, February 12-14, 2014.
  41. Chandrajit Chatterjee and Ram Rup Sarkar: Modelling and Forecast of Malaria Incidence, at the “CCMB - IISER Pune - NCL National Symposium on Theoretical and Mathematical Biology” held at the Yashwantrao Chavan Academy of Development Administration (YASHADA, a Govt. of Maharashtra Institute), Pune, August 17 - 22, 2009.
  42. Ram Rup Sarkar: Modelling of TH -cell signaling pathways, at the “CCMB - IISER Pune - NCL National Symposium on Theoretical and Mathematical Biology” held at the Yashwantrao Chavan Academy of Development Administration (YASHADA, a Govt. of Maharashtra Institute), Pune, August 17 - 22, 2009.
  43. Chandrajit Chatterjee and Ram Rup Sarkar: Modelling and Forecast of Malaria Incidence, at the International Symposium on “Integrating Physics, Chemistry, Mathematics and Biology to Understand Living Systems” (IPCMB2008), Bose Institute, Kolkata, December 4-6, 2008.
  44. M Rahuman Sheriff and Ram Rup Sarkar: In Silico Modelling of TH-Cell Signalling Pathways, at the International Biomedical Modeling School and Workshop (BMSW-2008) at NCBS, Bangalore, February 27 – March 3, 2008.
  45. Sandip Banerjee and Ram Rup Sarkar: A Time Delay Model for Control of Malignant Tumor Growth, at the International Biomedical Modeling School and Workshop (BMSW-2008) at NCBS, Bangalore, February 27 – March 3, 2008.
  46. M Rahuman Sheriff and Ram Rup Sarkar: Identification and Modelling of TH-Cell Signaling pathway – A logical Steady State Analysis, at the XXXI All India Cell Biology Conference & Symposium on Stem Cells: Application and Prospects (The Annual Meeting of the Indian Society of Cell Biology), at Banaras Hindu University, Varanasi, December 14-16, 2007.
  47. M Rahuman Sheriff and Ram Rup Sarkar: Networks of Signaling pathways in T-Cell, at the International Workshop on Physics in Biology: A Synergy (IWPBS-2007) at School of Physics, University of Hyderabad, Hyderabad, India, December 12-14, 2007.

Popular Scientific Writings

Contributed many articles in popular science journals and magazines in English and vernacular language.

  • R.R. Sarkar (2006) Malaria – ek promukh swasthya samashya (Malaria – a major human health problem), Jignyasa 8, 21-25 (a science annual in Hindi published from CCMB, ISSN 0972-4311).
  • R.R. Sarkar (2007) Gonitshastre Nobel O Ek Bharatiya: Srinivasa Varadhan (Nobel in Mathematics and an Indian: Srinivasa Varadhan), Gyan-Bichitra May 31(11) (Popular Science Magazine in Bengali, published from West Bengal & Tripura).