Teaching:

  • Associate Professor, Academy of Scientific & Innovative Research (AcSIR), CSIR-NCL Campus, Pune, India

  • PhD students (AcSIR): Awarded: 1; Pursuing 6 (4 SRFs + 2 JRFs).; Project JRFs - 5

  • Adjunct Faculty, Dr. Vikram Sarabhai Institute of Cell & Molecular Biology, MS University of Baroda, Vadodara, India

  • Modelling of Biological Systems for the PhD Course Work (3 Credit) of AcSIR and CSIR-NCL, Pune, India.

  • Numerical Methods and Programming for the PhD Course Work (3 Credit) of AcSIR and CSIR-NCL, Pune, India.

  • Systems Biology & Application of Computational Approaches for the PhD Course Work of National Centre For Cell Science (NCCS), Pune, India.

  • Advanced Modelling Techniques for the M.Tech, M.Tech.-Ph.d. (Integrated) (5 Credit) of Department of Technology, S.P. Pune University, Pune, India.

  • Population based models in Epidemiology for the BS 3rd and 4th Year Students of IISER-Pune, Pune, India.

  • Teaching Systems Biology (4 Credit) for the Integrated M.Sc. Course of University of Hyderabad, Hyderabad, India.

  • Mathematical Modelling of Biological Systems for the M.Tech Bioinformatics Course (3 Credit) of University of Hyderabad, Hyderabad, India.

  • Taught Biostatistics for the Course Work of Ph.D. students in Centre for Cellular and Molecular Biology (CCMB), Hyderabad, India.

  • Taught Biostatistics for the DNB Post-Graduate Programme of Kamineni Hospital, Hyderabad, India.

  • Guide of summer students under IASc – INSA - NASI Summer Research Fellowship Programme and CCMB Summer Training Programme.

  • Taught Biostatistics II in Master of Statistics Course and Mathematical Modeling in Bachelor of Statistics Course of Indian Statistical Institute, Kolkata, India with Dr. Joydev Chattopadhyay.

  • Guided many project students for Master of Statistics Course of Indian Statistical Institute, Kolkata, India with Dr. Joydev Chattopadhyay.

 

Dissertation/Project Thesis Supervised:

  1. “Boolean Network Modelling of Mammary stem cell development and Breast cancer” - Miss Sinal John Tuscano, Department of Biotechnology and Bioinformatics, Dr .D .Y. Patil Vidyapeeth, Pune during January 8 – April 30, 2018 (M.Sc. Dissertation Project).
  2. “Structural analysis of Proteins essential in Cancer signalling pathways” - Mr. Manas Joshi, Computational Life Science, Jacobs University, Bremen, Germany during June 5 – August 20, 2017 (Summer Project).
  3. “Simulation and Optimal Control of Tumor-Immuno Interaction” - Mr. Akarsh Kandpal, Chemical Engineering and Technology, IIT (Benaras Hindu University), Varanasi during May 15 – July 14, 2017 (Summer Project).
  4. “Studying mammary stem cell specification to Luminal and Myoepithelial lineage” - Ms. Astha Chandodwala, Cell and Molecular Biology, Faculty of Science, The Maharaja Sayajirao University, Baroda during May 15 – July 15, 2017 (CMB-IISER-Pune Summer Research Programme 2017).
  5. “Protein function prediction in Escherichia coli K-12 MG1655 metabolism using sequence based features” - Ms. Rohini J.S., Department of Biotechnology, Indian Institute of Technology Madras, Chennai during May 15 – July 15, 2017 (IASc-NASI-INSA Summer Research Programme, 2017).
  6. “Comparison of Codon Usage among different Eukaryotic Parasites” - Ms. Pranali Vilas Chaudhari, B.Tech. Bioinformatics, School of Biotechnology and Bioinformatics, D. Y. Patil University, Navi Mumbai (B.Tech. Dissertation Project, during January – May, 2017 ).
  7. “Structural and Functional Study of Protein in Signalling Pathways” - Ms. Meenakshi Joshi, M.Tech. Bioinformatics, Department of Biosciences and Biotechnology, Banasthali University, Rajasthan  (M.Tech. Dissertation Project, during July, 2016 – April, 2017).
  8. “Role of Regulatory T-cells in Chronic Myelogenous Leukemia” - Mr. Sourav Kanti Pradhan, M.Sc. Department of Bio-physics, Molecular Biology and Bioinformatics, University of Calcutta, Kolkata under National Network for Mathematical and Computational Biology Internship Program 2016  (during 23rd May to 12th August, 2016).
  9. “Regulation of Glioma and Glioma Stem Cells by Cytokine Networks” - Ms. Bhavyata Patel, 3rd Yr., Cell and Molecular Biology, Faculty of Science, The Maharaja Sayajirao University, Baroda under CMB-IISER-Pune Summer Research Programme (during 16th May to 15th July, 2016).
  10. “Study of Important Drug Target Proteins of Signaling Pathway in Cancer Therapy” - Ms. K. Latha Sai Mounika, 2nd Yr., Integrated M.Sc. Biotechnology, GITAM University, Visakhapatnam under IASc-INSA-NASI Summer Research Fellowship Programme, 2016 (during 28th April to 24th June, 2016).
  11. “Study of Metabolic Pathways in Glioblastoma Cancer” - Ms. Nabiha Sadique, 2nd Yr., B.Sc. Biotechnology, Mata Gujri College of Professional Studies, Indore under IASc-INSA-NASI Summer Research Fellowship Programme, 2016 (during 1st April to 28th May, 2016).
  12. “Model building and gene essentiality prediction in Escherichia coli using machine learning approach” - Ms. Archita Mazumder, 2nd Year, M.Sc., Bioinformatics, Savitribai Phule Pune University, Pune during December 2015 to May, 2016 (M.Sc. Dissertation Project).
  13. “Linking Within-Host and Between-Host Dynamics Model for Leishmaniasis” - Ms. Varsha Shivraj Biradar, M.Sc., Department of Mathematics, S.R.T.M University, Nanded under Malhotra Weikfield foundation, Pune Internship Programme (during 13th October, 2015 to 14th April, 2016).
  14. “Modelling of Infectious Diseases” - Mr. Devrat Kaushal, 2nd Year, B.Sc., Mathematics, Hindu College, University of Delhi, Delhi under IASc-INSA-NASI Summer Research Fellowship Programme, 2015 (during 8th June to 8th August, 2015).
  15. “Network Analysis of Major Human Cell Signaling Pathways” - Ms. Indu Raghavan, 4th yr, M.Sc. Life Sciences, School of Life Sciences, Bharathidasan University, Trichy under IASc-INSA-NASI Summer Research Fellowship Programme, 2015 (during 11th May to 12th July, 2015).
  16. “In-silico drug designing to identify potential drug candidates against Cutaneous Leishmaniasis” - Mr. Shomeek Chowdhury, 3rd Year, Integrated M.Sc., Cell & Molecular Biology, M.S. University, Baroda under IISER-Pune Summer Research Programme (during 18th May to 11th July, 2015).
  17. “Reconstruction and Analysis of genome scale metabolic pathways in Leishmania infantum.” - Mr. Apurv Mishra, 4th Year, BE Biotechnology, Birla Institute of Technology, Mesra (during 15th January to 11th July, 2015).
  18. “Dynamic Modelling of Human Metabolic Pathways” - Ms. Ritutama Ghosh, Department of Biophysics, Molecular Biology and Bioinformatics, University of Calcutta, Kolkata (during 9th June to 7th August, 2014).
  19. “Stochastic Modeling of Biochemical Pathways” - Ms. Prachi Gupta, Department of Mathematics, Indian Institute of Technology, Chennai, (under National Network for Mathematical and Computational Biology Internship Program 2014 during 25th June to 26th August, 2014).
  20. “Study of macrophage, T-cell interactions during Leishmania infection” - Mr. Shomeek Chowdhury, Department of Cell and Molecular Biology, Faculty of Science, M.S. University, Baroda (during 16th May to 22nd July, 2014).
  21. “Study of Metabolic Pathways Involved in Glioma” - Ms. Sandhya Kamath, Department of Biotechnology, NMAM Institute of Technology, Nitte, Karnataka (under IASc – INSA - NASI Summer Research Fellowship Program 2014 during 26th May to 20th July, 2014).
  22. “Dynamical Analysis of Signalling Pathways” - Mr. Swarnabha Ghosh, Department of Physics, St. Xavier's College, Mumbai (under IASc – INSA - NASI Summer Research Fellowship Program 2014 during 7th April to 7th June, 2014).
  23. “Statistical Analysis of Epidemiological Diseases” - Mr. Souradip Mukherjee, Department of Statistics, Bidhannagar Govt. College, University of Calcutta, Kolkata, Kolkata (under IASc – INSA - NASI Summer Research Fellowship Program 2013 during 2nd August to 2nd October 2013).
  24. “Reconstruction and Computational Analysis of  Signaling Pathways in Human” - Mr. Shomeek Chowdhury, Department of Cell and Molecular Biology, Faculty of Science, M.S. University, Baroda (under IASc – INSA - NASI Summer Research Fellowship Program 2013 during 3rd June to 3rd August 2013).
  25. “Reconstruction and Logical Analysis of important signaling pathways in Human” - Ms. Madhurita Goswami, Department of Biophysics, Molecular Biology & Bioinformatics, University of Calcutta, Kolkata (under IASc – INSA - NASI Summer Research Fellowship Program 2012 during 21st May to 17th July 2012).
  26. “Mathematical Modeling of Visceral Leishmaniasis and Disease Spread Control” - Mr. Chavva Dhiraj Sain, St. Joseph’s College, Bangalore (under IASc – INSA - NASI Summer Research Fellowship Program 2012 during 16th April  to 12th June, 2012).
  27. “Mathematical modelling of major signalling pathways in Human” - Mr. Kanak Niyan Joshi, Department of Biological Sciences, IISER-Bhopal, Bhopal, during 14th May  to 3rd July, 2012.
  28. “Modelling and Study of signalling pathways in cancer cells” - Ms. Urvashi Dubey, Department of Bioinformatics, Birla Institute of Technology, Mesra, Ranchi (under IASc – INSA - NASI Summer Research Fellowship Program 2011 during 20th May to 19th July 2011).
  29. “Computational study of biochemical pathways in T Cells” - Ms. Dhanya. S, Department of Bioinformatics, TamilNadu Agricultural University, Coimbatore (under IASc – INSA - NASI Summer Research Fellowship Program 2011 during 20th May to 19th July 2011).
  30. “Reconstruction and Structural Analysis Signalling Pathways” - Ms. Rachana Narendra Pradhan, Institute of Bioinformatics and Biotechnology, University of Pune, Pune (Dissertation Thesis, during January to May, 2011).
  31. “Reconstruction and Modeling of MAP Kinase signaling pathway” - Ms. Sonia Chothani, Department of Biotechnology, Indian Institute of Technology Madras, Chennai (under IASc – INSA - NASI Summer Research Fellowship Program 2010 during 12th May to 12th July 2010).
  32. “Protein fold prediction from Contact Maps” - Ms. Suvarnavani K, Department of Computer Science and Engineering, V. R. Siddhartha Engineering College, Autonomous, Vijayawada (under IASc – INSA - NASI Summer Research Fellowship Program 2010 during 15th April to 15th June 2010).
  33. “Study of Different Time Series Models on Stock Price and Malaria Incidence” - Mr. Chandrajit Chatterjee, Department of Statistics, University of Madras, Chennai (under IASc – INSA - NASI Summer Research Fellowship Program 2009 during 9th June to 8th August 2009).
  34. “Identification and Modelling of Pathways in Cancer Cells – A Logical Steady State and Flux Balance Analysis Approach” – Mr. Naveen Joshi, Vellore Institute of Technology University, Vellore (under IASc – INSA - NASI Summer Research Fellowship Program 2009 during 11th May to 10th July 2009).
  35. “Mathematical and Statistical Modelling of Malaria” - Mr. Chandrajit Chatterjee, Department of Statistics, University of Madras, Chennai (under IASc – INSA - NASI Summer Research Fellowship Program 2008 during 26th May to 28th July 2008).
  36. “Mathematical Modelling of Malaria – Interaction Between Parasites and T – Cells of Human” - S.Umadevi, Department of Bioinformatics, School of Life sciences, Bharathidasan University, Thiruchirappalli-620 024, Tamil Nadu. (Dissertation Thesis, during January 2 to May 26 2008).
  37. “Identification and Modelling to T-Cell and Apoptosis signalling pathway with special emphasis on T11TS/S-LFA3 induced activation - A Logical Steady State Analysis” - Mr. M Rahuman Sheriff, Animal Biotechnology, Bharathidasan University, Tiruchirappalli (under CCMB Summer Training Programme, 2007 during 15th May to 15th July 2007).
  38. “Study on Tryptophan metabolic pathway with special emphasis on Serotonin activity – A Flux Balance Analysis Approach” - Mr. J.Febin Prabhu Dass, SBCBE, Vellore Institute of Technology, Vellore (under IASc – INSA - NASI Summer Research Fellowship Program 2007 during 14th May to 8th July 2007).